STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY57693.1Deoxyribonuclease V; COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR014048: IPR007581; KEGG: abi:Aboo_0455 methylated-DNA/protein-cysteine methyltransferase; PFAM: Endonuclease V; Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PRIAM: Deoxyribonuclease V; SPTR: O6-methylguanine-DNA methyltransferase/endonuclease V; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; Endonuclease V. (333 aa)    
Predicted Functional Partners:
ADY57692.1
KEGG: plm:Plim_4166 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
    0.640
ADY57690.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.517
nnrE
YjeF-related protein; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
       0.517
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.476
ADY60498.1
Tripeptidyl-peptidase II; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: gga:428020 tripeptidyl peptidase II; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; PRIAM: Tripeptidyl-peptidase II; SPTR: Pyrolysin; PFAM: Tripeptidyl peptidase II; Subtilase family.
 
     0.473
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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