STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY57738.1COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482; KEGG: plm:Plim_0753 type II secretion system protein E; PFAM: Type II secretion system protein E; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein. (433 aa)    
Predicted Functional Partners:
ADY60403.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593: IPR001482; KEGG: psl:Psta_2137 type II secretion system protein E; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: Putative secretion pathway ATPase; PFAM: Type II/IV secretion system protein.
  
  
 
0.919
ADY60779.1
Type II secretion system protein E (GspE); COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831: IPR001482: IPR003593; KEGG: plm:Plim_4189 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: General secretion pathway protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E.
  
  
 
0.914
ADY58249.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: plm:Plim_1294 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F-putative pilus protein; PFAM: Bacterial type II secretion system protein F domain.
 
 0.891
ADY60148.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: plm:Plim_0407 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
 
 0.891
ADY60405.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: mmr:Mmar10_0383 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type IV pilus assembly protein PilC; PFAM: Bacterial type II secretion system protein F domain.
 
 
 0.891
ADY60780.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: plm:Plim_0156 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type 4 fimbrial assembly protein pilC; PFAM: Bacterial type II secretion system protein F domain.
 
 0.891
ADY60404.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: sml:Smlt2740 putative general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain.
 
 
 0.890
ADY62012.1
Peptidase A24A domain protein; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627; KEGG: geo:Geob_3081 peptidase A24A domain protein; PFAM: Peptidase A24A, N-terminal; SPTR: Peptidase A24A domain protein; PFAM: Bacterial Peptidase A24 N-terminal domain.
 
 
 0.794
ADY61720.1
Peptidase A24A domain protein; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627; KEGG: plm:Plim_1574 peptidase A24A domain protein; PFAM: Peptidase A24A, N-terminal; SPTR: Peptidase A24A domain protein; PFAM: Bacterial Peptidase A24 N-terminal domain.
 
 
 0.791
ADY60406.1
Type II secretion system F domain protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: rba:RB8711 type IV pilus assembly protein TapC; PFAM: Type II secretion system F domain; SPTR: Fimbrial assembly protein PilC; PFAM: Bacterial type II secretion system protein F domain.
 
 
 0.606
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.