STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY57900.1KEGG: gvi:gll1433 hypothetical protein; SPTR: Gll1433 protein. (141 aa)    
Predicted Functional Partners:
ADY57899.1
KEGG: mau:Micau_5026 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADY57901.1
Hypothetical protein; KEGG: cjk:jk1129 dihydrodipicolinate synthase; SPTR: Putative uncharacterized protein.
       0.519
ADY57898.1
PUA domain containing protein; COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR002478; KEGG: plm:Plim_2179 methyltransferase small; SMART: Pseudouridine synthase/archaeosine transglycosylase; SPTR: Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase.
       0.405
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.