STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY57909.1Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR019546: IPR000683: IPR006311; KEGG: plm:Plim_0037 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (438 aa)    
Predicted Functional Partners:
ADY57908.1
Sulphatase-modifying factor protein; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: plm:Plim_0907 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; manually curated; PFAM: Formylglycine-generating sulfatase enzyme.
 
     0.794
ADY60806.1
InterPro IPR010496; KEGG: sli:Slin_5725 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.766
ADY60817.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: plm:Plim_1283 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.761
ADY58440.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: rba:RB3944 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.754
ADY59223.1
InterPro IPR010496; KEGG: plm:Plim_1708 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.753
ADY62057.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311: IPR012307; KEGG: rba:RB12844 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
    0.752
ADY61869.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR006311: IPR019546: IPR012307; KEGG: rbi:RB2501_05755 probable glyoxylate-induced protein; PFAM: Xylose isomerase, TIM barrel domain; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Probable glyoxylate-induced protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
    0.750
ADY58701.1
InterPro IPR010496; KEGG: plm:Plim_2940 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.749
ADY58309.1
InterPro IPR010496; KEGG: dfe:Dfer_0069 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.746
ADY61173.1
InterPro IPR010496; KEGG: psl:Psta_2463 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.746
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.