STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY57949.1TGF-beta receptor type I/II extracellular region; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109; KEGG: ote:Oter_1524 TGF-beta receptor type I/II extracellular region; PFAM: Oligopeptide transporter; SPTR: Amino acid/peptide transporter; PFAM: POT family. (474 aa)    
Predicted Functional Partners:
ADY57982.1
Abortive infection protein; InterPro IPR003675; KEGG: noc:Noc_1193 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family.
  
     0.532
ADY57948.1
InterPro IPR000914; KEGG: plm:Plim_1700 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
     
 0.483
ADY59553.1
Protein of unknown function DUF1597; InterPro IPR011486; KEGG: rba:RB8345 hypothetical protein; PFAM: Protein of unknown function DUF1597; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1597).
  
     0.472
ADY57947.1
Dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722: IPR006680; KEGG: plm:Plim_0292 dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase 1; PRIAM: Allantoinase; SPTR: Dihydroorotase; TIGRFAM: Dihydroorotase multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type.
       0.418
ADY59049.1
COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: rba:RB9535 amino acid permease homolog YkbA; PFAM: Amino acid permease domain; SPTR: Amino acid permease homolog ykbA; PFAM: Amino acid permease.
  
 
 0.417
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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