STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58037.1COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: pat:Patl_1742 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: Putative uncharacterized protein orf7; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: conserved hypothetical protein TIGR02453. (231 aa)    
Predicted Functional Partners:
ADY58038.1
KEGG: plm:Plim_0851 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.438
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.