STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58109.1COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002218; KEGG: psl:Psta_2115 tryptophan halogenase; PFAM: Glucose-inhibited division protein A-related; SPTR: Probable alkylhalidase; PFAM: Tryptophan halogenase. (423 aa)    
Predicted Functional Partners:
ADY62207.1
Protein of unknown function DUF116; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR002829: IPR000092; KEGG: plm:Plim_2915 protein of unknown function DUF116; PFAM: Protein of unknown function DUF116; Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Protein of unknown function DUF116.
 
 
 0.648
ADY58953.1
KEGG: plm:Plim_3329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.610
ADY57653.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: plm:Plim_3326 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Aldehyde dehydrogenase family.
  
     0.602
ADY62003.1
KEGG: psl:Psta_3367 pyrrolo-quinoline quinone; SPTR: Pyrrolo-quinoline quinone.
  
     0.577
ADY58897.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR002372: IPR018391; KEGG: plm:Plim_2943 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Putative uncharacterized protein; PFAM: PQQ enzyme repeat.
  
     0.571
ADY61172.1
KEGG: rba:RB8085 PQQ repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.560
ADY60000.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: plm:Plim_0221 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Putative uncharacterized protein.
  
     0.557
ADY59551.1
KEGG: psl:Psta_0754 pyrrolo-quinoline quinone; SPTR: Putative uncharacterized protein.
  
     0.540
ADY60389.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: psl:Psta_1668 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Probable serine/threonine protein kinase afsK.
  
     0.539
ADY58125.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR002372: IPR018391; KEGG: psl:Psta_1668 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Probable serine/threonine protein kinase afsK; PFAM: PQQ enzyme repeat.
  
     0.537
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.