STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58227.1KEGG: mva:Mvan_5188 hypothetical protein; SPTR: Hypothetical leucine rich repeat protein. (71 aa)    
Predicted Functional Partners:
ADY58228.1
Plasmid stabilization system; InterPro IPR007712; KEGG: sus:Acid_6411 plasmid stabilization system protein; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system; manually curated; PFAM: Plasmid stabilisation system protein.
       0.592
ADY58229.1
Addiction module component, TIGR02574 family; InterPro IPR013406; KEGG: scl:sce3959 hypothetical protein; PFAM: Addiction module component, CHP02574; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module component, CHP02574; PFAM: Putative addiction module component; TIGRFAM: putative addiction module component, TIGR02574 family.
       0.592
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.