STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58325.1phospholipase/Carboxylesterase; COGs: COG3509 Poly(3-hydroxybutyrate) depolymerase; InterPro IPR003140; KEGG: hau:Haur_1204 phospholipase/carboxylesterase; PFAM: Phospholipase/carboxylesterase; SPTR: Possible conserved lipoprotein lpqp; PFAM: Esterase PHB depolymerase. (240 aa)    
Predicted Functional Partners:
ADY61365.1
Hypothetical protein; COGs: COG3509 Poly(3-hydroxybutyrate) depolymerase; KEGG: amr:AM1_4420 esterase, putative; SPTR: Esterase, putative; PFAM: Prolyl oligopeptidase family.
  
     0.773
ADY58324.1
Polyketide cyclase/dehydrase; InterPro IPR019587; KEGG: phe:Phep_1086 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
       0.529
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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