STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58469.1Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR002372: IPR018391; KEGG: rba:RB638 serine/threonine protein kinase; PFAM: Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Similar to serine/threonine protein kinase; PFAM: PQQ enzyme repeat. (414 aa)    
Predicted Functional Partners:
ADY59906.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: plm:Plim_0100 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
  
     0.774
ADY58953.1
KEGG: plm:Plim_3329 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
ADY57653.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: plm:Plim_3326 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Aldehyde dehydrogenase family.
  
     0.765
ADY62207.1
Protein of unknown function DUF116; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR002829: IPR000092; KEGG: plm:Plim_2915 protein of unknown function DUF116; PFAM: Protein of unknown function DUF116; Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Protein of unknown function DUF116.
  
     0.750
ADY57643.1
COGs: COG1657 Squalene cyclase; InterPro IPR001330; KEGG: plm:Plim_0903 squalene cyclase-like protein; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Probable squalene-hopene cyclase; PFAM: Pectic acid lyase; TIGRFAM: squalene/oxidosqualene cyclases.
  
     0.749
ADY59639.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: plm:Plim_2941 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Probable serine/threonine protein kinase related protein; PFAM: PQQ enzyme repeat.
  
     0.742
ADY60395.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: plm:Plim_2475 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.734
ADY57694.1
KEGG: rba:RB7777 NosR regulatory protein; SPTR: FMN-binding domain protein.
  
     0.719
ADY57644.1
KEGG: plm:Plim_3312 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Probable ferredoxin MJ0251-putative Fe-S containing oxidoreductase.
  
     0.715
ADY59722.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: plm:Plim_2841 radical SAM domain protein; PFAM: Radical SAM; SPTR: AstB/chuR-related protein-putative enzyme of the MoaA / nifB / pqqE family; PFAM: Radical SAM superfamily.
  
    0.715
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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