STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58579.1KEGG: mse:Msed_0948 hypothetical protein; SPTR: Putative uncharacterized protein. (90 aa)    
Predicted Functional Partners:
ADY58578.1
KEGG: ssl:SS1G_10400 hypothetical protein.
       0.588
ADY58580.1
Hypothetical protein; KEGG: tgu:100228361 similar to glutamyl aminopeptidase (aminopeptidase A); SPTR: Predicted protein.
       0.572
ADY58577.1
AAA ATPase central domain protein; COGs: COG2255 Holliday junction resolvasome helicase subunit; InterPro IPR003593: IPR003959: IPR008823; KEGG: dth:DICTH_1502 Holliday junction DNA helicase RuvB; PFAM: ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit.
       0.474
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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