STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58597.1Hypothetical protein; KEGG: gox:GOX2117 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; SPTR: Proline dehydrogenase/d-1-pyrroline-5-carboxylate dehydrogenase. (147 aa)    
Predicted Functional Partners:
ADY58596.1
KEGG: fre:Franean1_2775 hypothetical protein; SPTR: Ankyrin.
       0.539
ADY58598.1
Hypothetical protein; KEGG: sro:Sros_5922 uroporphyrinogen-III synthase-like protein; SPTR: Uroporphyrinogen-III synthase-like protein.
       0.532
ADY58599.1
Transposase; COGs: COG3293 Transposase and inactivated derivatives; KEGG: nwi:Nwi_3115 transposase; SPTR: Transposase.
       0.403
ADY58600.1
Transposase IS4 family protein; COGs: COG3293 Transposase and inactivated derivatives; InterPro IPR002559; KEGG: rsl:RPSI07_mp0251 transposase, IS4-like; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4-like; PFAM: Transposase DDE domain.
       0.403
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.