STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58621.1COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593: IPR003959; KEGG: ote:Oter_1429 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division cycle protein 48-related protein; PFAM: ATPase family associated with various cellular activities (AAA). (447 aa)    
Predicted Functional Partners:
ADY58620.1
InterPro IPR019734: IPR001440; KEGG: ote:Oter_1428 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
 
     0.883
ADY58619.1
InterPro IPR019734: IPR001440; KEGG: ote:Oter_1428 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat.
 
     0.845
ADY58618.1
InterPro IPR019734: IPR001440; KEGG: ote:Oter_1428 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
 
     0.820
ADY61115.1
Peptidase M28; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR001478: IPR011659: IPR007484; KEGG: rba:RB6120 TolB protein; PFAM: Peptidase M28; WD40-like Beta Propeller; SMART: PDZ/DHR/GLGF; SPTR: Probable TolB protein; PFAM: PA domain; WD40-like Beta Propeller Repeat; Peptidase family M28.
   
 0.673
ADY58611.1
COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: bph:Bphy_3371 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused.
    
 
 0.652
ADY61123.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR001478: IPR003137: IPR007484; KEGG: plm:Plim_3899 peptidase M28; PFAM: Peptidase M28; Protease-associated PA; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Peptidase M28; PFAM: PA domain; PDZ domain (Also known as DHR or GLGF); Peptidase family M28.
   
 0.634
ADY59950.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.558
ADY58622.1
Hypothetical protein; KEGG: amc:MADE_03484 quinol oxidase, subunit II; SPTR: Quinol oxidase, subunit II.
       0.524
cysS
COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR002308: IPR015803; KEGG: sru:SRU_1014 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
    0.510
ADY57659.1
Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: plm:Plim_3385 protein of unknown function UPF0027; PFAM: Uncharacterised protein family UPF0027; SPTR: RtcB protein; PFAM: Uncharacterized protein family UPF0027.
 
     0.506
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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