STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58629.1Hypothetical protein; InterPro IPR006626; KEGG: plm:Plim_2976 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3442). (981 aa)    
Predicted Functional Partners:
ADY60979.1
KEGG: plm:Plim_1983 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.740
ADY61059.1
InterPro IPR007831; KEGG: plm:Plim_3454 general secretory system II protein E domain protein; PFAM: General secretory system II, protein E, N-terminal; SPTR: Type IV fimbrial assembly protein PilB; PFAM: GSPII_E N-terminal domain.
  
 
   0.734
ADY58323.1
KEGG: cyn:Cyan7425_1930 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.730
ADY61647.1
Protein of unknown function DUF2079, membrane; COGs: COG3463 membrane protein; InterPro IPR018650; KEGG: plm:Plim_1336 membrane protein-like protein; PFAM: Protein of unknown function DUF2079, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2079).
  
     0.715
ADY58673.1
DinB family protein; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: ddr:Deide_2p02260 putative DinB; PFAM: DinB; SPTR: Putative dinB; PFAM: DinB family.
  
     0.703
ADY58794.1
Portal protein lambda; COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: plm:Plim_3545 portal protein lambda; PFAM: Phage portal protein, lambda; SPTR: Portal protein lambda; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family.
  
     0.692
ADY60778.1
NolW domain protein; InterPro IPR005644; KEGG: plm:Plim_4190 NolW domain protein; PFAM: NolW-like; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II/III secretion system short domain.
  
    0.687
ADY61152.1
COGs: COG5653 Protein involved in cellulose biosynthesis (CelD); KEGG: plm:Plim_3884 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.685
ADY59993.1
COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: plm:Plim_1969 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: Putative uncharacterized protein; PFAM: RmlD substrate binding domain.
  
     0.675
ADY61234.1
InterPro IPR003347; KEGG: plm:Plim_1842 transcription factor jumonji/aspartyl beta-hydroxylase; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; SPTR: Transcription factor jumonji/aspartyl beta-hydroxylase; PFAM: Cupin superfamily protein.
  
    0.674
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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