STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58690.1KEGG: lma:L2743.12 hypothetical protein; SPTR: Putative uncharacterized protein L779.04. (195 aa)    
Predicted Functional Partners:
ADY58689.1
OmpA/MotB domain protein; COGs: COG1360 Flagellar motor protein; KEGG: psl:Psta_4351 OmpA/MotB domain protein; SPTR: Putative uncharacterized protein; PFAM: OmpA family.
       0.773
ADY58691.1
DEAD/DEAH box helicase domain protein; COGs: COG1200 RecG-like helicase; InterPro IPR014001: IPR001650: IPR004365: IPR011545; KEGG: plm:Plim_0908 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG.
       0.572
ADY58688.1
N-acetylgalactosamine-6-sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: pdi:BDI_2321 arylsulfatase A; PFAM: Sulfatase; PRIAM: N-acetylgalactosamine-6-sulfatase; SPTR: Sulfatase family protein; PFAM: Sulfatase; alpha/beta hydrolase fold.
       0.434
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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