STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58702.1KEGG: plm:Plim_0831 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Sulfotransferase domain. (375 aa)    
Predicted Functional Partners:
ADY58703.1
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: bfa:Bfae_28180 arylsulfatase A family protein; PFAM: Sulfatase; SPTR: Arylsulfatase A family protein; PFAM: Sulfatase.
       0.592
ADY62277.1
KEGG: plm:Plim_1806 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.544
ADY60577.1
KEGG: rba:RB4532 MchE protein; SPTR: MchE protein-like.
  
 
   0.506
ADY58701.1
InterPro IPR010496; KEGG: plm:Plim_2940 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
   
   0.503
ADY61220.1
KEGG: plm:Plim_0670 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.470
ADY59803.1
Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001680: IPR001254: IPR019781; KEGG: psl:Psta_1852 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; WD40 repeat, subgroup; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; WD domain, G-beta repeat.
    
 0.446
ADY60785.1
KEGG: plm:Plim_3639 type II secretory pathway component PulK-like protein; SPTR: Probable general secretion pathway protein K; PFAM: General secretion pathway protein K.
  
     0.444
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.412
ADY58456.1
InterPro IPR004846; KEGG: plm:Plim_0641 hypothetical protein; PFAM: Type II/III secretion system; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
    0.409
ADY58313.1
Protein of unknown function DUF1214; COGs: COG5361 conserved hypothetical protein; InterPro IPR010679: IPR010621; KEGG: mex:Mext_0264 hypothetical protein; PFAM: Protein of unknown function DUF1214; Protein of unknown function DUF1254; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1214); Protein of unknown function (DUF1254).
  
     0.407
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.