STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58767.1KEGG: pan:PODANSg4835 hypothetical protein; SPTR: Predicted CDS Pa_7_2190. (75 aa)    
Predicted Functional Partners:
ADY58768.1
Holliday junction DNA helicase RuvB domain protein; COGs: COG2255 Holliday junction resolvasome helicase subunit; InterPro IPR011704: IPR008823; KEGG: kol:Kole_0208 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-5; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus.
       0.594
ADY58766.1
Hypothetical protein; KEGG: mmu:72469 phospholipase C, delta 3; SPTR: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-3.
       0.581
ADY58769.1
Hypothetical protein; KEGG: ame:409598 similar to pawn CG11101-PA; SPTR: Putative uncharacterized protein.
       0.542
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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