STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY58969.1Hypothetical protein; KEGG: plm:Plim_4071 spermine synthase; SPTR: Spermine/spermidine synthase family protein. (1019 aa)    
Predicted Functional Partners:
ADY60121.1
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: plm:Plim_2500 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
    
   0.825
ADY62278.1
KEGG: plm:Plim_1805 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.785
ADY59596.1
Hypothetical protein; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: plm:Plim_3516 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.773
ADY61647.1
Protein of unknown function DUF2079, membrane; COGs: COG3463 membrane protein; InterPro IPR018650; KEGG: plm:Plim_1336 membrane protein-like protein; PFAM: Protein of unknown function DUF2079, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2079).
  
     0.773
ADY61615.1
InterPro IPR011521; KEGG: plm:Plim_1186 YTV domain protein; PFAM: YTV; SPTR: YTV domain protein; PFAM: YTV.
 
     0.769
ADY61059.1
InterPro IPR007831; KEGG: plm:Plim_3454 general secretory system II protein E domain protein; PFAM: General secretory system II, protein E, N-terminal; SPTR: Type IV fimbrial assembly protein PilB; PFAM: GSPII_E N-terminal domain.
  
     0.767
ADY60778.1
NolW domain protein; InterPro IPR005644; KEGG: plm:Plim_4190 NolW domain protein; PFAM: NolW-like; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II/III secretion system short domain.
  
     0.765
ADY60484.1
KEGG: plm:Plim_2754 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.755
ADY59925.1
Protein of unknown function, membrane YfhO; InterPro IPR018580; KEGG: plm:Plim_0394 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO.
  
     0.750
ADY59993.1
COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: plm:Plim_1969 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: Putative uncharacterized protein; PFAM: RmlD substrate binding domain.
  
   
 0.747
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.