STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59042.1Hypothetical protein; KEGG: mei:Msip34_1909 O-antigen polymerase; SPTR: Putative uncharacterized protein. (94 aa)    
Predicted Functional Partners:
ADY59041.1
COGs: COG4312 conserved hypothetical protein; InterPro IPR010296; KEGG: kfl:Kfla_2601 protein of unknown function DUF899 thioredoxin family protein; PFAM: Protein of unknown function DUF899, thioredoxin-like; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF899).
       0.773
ADY59043.1
YCII-related protein; COGs: COG3795 conserved hypothetical protein; InterPro IPR005545; KEGG: psl:Psta_2743 YCII-related protein; PFAM: YCII-related; SPTR: DGPFAETKE domain protein; PFAM: YCII-related domain.
       0.671
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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