STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59347.1Type VI secretion protein, EvpB/VC_A0108 family; COGs: COG3517 conserved hypothetical protein; InterPro IPR010269; KEGG: acr:Acry_3072 hypothetical protein; PFAM: Protein of unknown function DUF877; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family. (499 aa)    
Predicted Functional Partners:
ADY59346.1
Type VI secretion protein, VC_A0107 family; COGs: COG3516 conserved hypothetical protein; InterPro IPR008312; KEGG: azl:AZL_017870 hypothetical protein; PFAM: Uncharacterised conserved protein UCP028301; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family.
 
 0.999
ADY59349.1
COGs: COG4455 Protein of avirulence locus involved in temperature-dependent protein secretion; InterPro IPR009211; KEGG: azl:AZL_017900 SciE type virulence protein; PFAM: virulence protein, SciE type; SPTR: SciE type virulence protein; PFAM: ImpE protein.
 
    0.943
ADY59351.1
Type VI secretion protein, VC_A0110 family; COGs: COG3519 conserved hypothetical protein; InterPro IPR010272; KEGG: azl:AZL_017920 hypothetical protein; PFAM: Type VI secretion system, VCA0110; SPTR: Uncharacterized protein conserved in bacteria; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family.
 
  
 0.942
ADY59345.1
Type VI secretion-associated protein, ImpA family; COGs: COG3515 conserved hypothetical protein; InterPro IPR017740: IPR010657; KEGG: azl:AZL_017860 ImpA-related N-terminal protein; PFAM: ImpA, N-terminal; SPTR: ImpA-related N-terminal protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, ImpA family.
 
  
 0.920
ADY59353.1
Type VI secretion ATPase, ClpV1 family; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR017729: IPR003593: IPR004176: IPR003959: IPR 013093: IPR019489; KEGG: azl:AZL_017820 chaperone protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase, central region:Clp, N terminal:Clp, N terminal; TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activit [...]
 
 0.907
ADY59350.1
Type VI secretion system lysozyme-related protein; COGs: COG3518 conserved hypothetical protein; InterPro IPR017737: IPR007048; KEGG: ttu:TERTU_1652 type VI secretion system lysozyme-related protein; PFAM: GPW/gp25; SPTR: Type VI secretion system lysozyme-related protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein.
 
  
 0.903
ADY59352.1
Type VI secretion protein, VC_A0111 family; COGs: COG3520 conserved hypothetical protein; InterPro IPR010732; KEGG: azl:AZL_017930 hypothetical protein; PFAM: Protein of unknown function DUF1305; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family.
 
  
 0.901
ADY59354.1
Type VI secretion system effector, Hcp1 family; COGs: COG3157 Hemolysin-coregulated protein (uncharacterized); InterPro IPR017728: IPR008514; KEGG: cvi:CV_3977 hypothetical protein; PFAM: Virulence factor, secretion apparatus; SPTR: Putative uncharacterized protein; TIGRFAM: Type VI secretion system effector, Hcp1; PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family.
 
 
 0.892
ADY59360.1
Type VI secretion system Vgr family protein; COGs: COG3501 conserved hypothetical protein; InterPro IPR017847: IPR006533; KEGG: azc:AZC_2592 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Phage late control gene D protein (GPD); Phage-related baseplate assembly protein; TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein.
 
  
 0.860
ADY59364.1
Type VI secretion protein, VC_A0114 family; COGs: COG3522 conserved hypothetical protein; InterPro IPR010263; KEGG: psl:Psta_1826 type VI secretion protein, VC_A0114 family; PFAM: Protein of unknown function DUF876, bacterial; SPTR: Type VI secretion protein, VC_A0114 family; TIGRFAM: Protein of unknown function DUF876, bacterial; PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family.
 
  
 0.860
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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