STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59406.1InterPro IPR000537; KEGG: plm:Plim_2631 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; PFAM: UbiA prenyltransferase family. (296 aa)    
Predicted Functional Partners:
ADY60196.1
UbiD family decarboxylase; COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: gur:Gura_1842 UbiD family decarboxylase; PFAM: Carboxylyase-related; SPTR: Carboxylyase-related protein; TIGRFAM: Carboxylyase-related; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; Belongs to the UbiD family.
    
 0.919
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.919
ADY58947.1
COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR006371: IPR000537; KEGG: plm:Plim_3757 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
     
  0.900
ADY61976.1
TatD-related deoxyribonuclease; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130; KEGG: cyc:PCC7424_2285 TatD-related deoxyribonuclease; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative uncharacterized protein; PFAM: TatD related DNase.
 
   
 0.797
ADY61549.1
KEGG: npu:Npun_F5232 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.792
ADY58651.1
COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: rba:RB6147 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase.
 
   
 0.786
ADY60134.1
Type I phosphodiesterase/nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: psl:Psta_3875 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
 
   
 0.784
ADY60284.1
KEGG: plm:Plim_3643 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.775
ADY57735.1
KEGG: psl:Psta_3882 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.563
ADY60595.1
Heme-binding protein; InterPro IPR013427; KEGG: plm:Plim_1723 heme-binding protein; SPTR: Heme-binding protein; TIGRFAM: Haem-binding domain, putative; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.557
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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