STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59423.1Membrane-flanked domain DUF304; InterPro IPR005182; KEGG: rba:RB12236 hypothetical protein; PFAM: Protein of unknown function DUF304, transmembrane flanked domain, bacterial; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane flanked domain. (196 aa)    
Predicted Functional Partners:
ADY59909.1
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: rba:RB3967 sodium/proline symporter (proline permease); PFAM: Sodium/solute symporter; SPTR: Probable sodium/proline symporter (Proline permease); PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.686
ADY59140.1
InterPro IPR011971: IPR019052; KEGG: rba:RB4347 hypothetical protein; PFAM: Protein of unknown function DUF2383; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein.
  
    0.604
ADY59421.1
InterPro IPR011971: IPR019052; KEGG: rba:RB4347 hypothetical protein; PFAM: Protein of unknown function DUF2383; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein.
  
    0.604
ADY60677.1
Protein of unknown function DUF1588; InterPro IPR013039; KEGG: rba:RB3034 signal peptide; PFAM: Protein of unknown function DUF1588; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Planctomycete cytochrome C.
  
     0.565
ADY60812.1
FecR protein; InterPro IPR006860: IPR006558; KEGG: rba:RB5421 cycloinulo-oligosaccharide fructanotransferase; PFAM: FecR protein; SMART: LamG-like jellyroll fold; SPTR: Similar to cycloinulo-oligosaccharide fructanotransferase; PFAM: FecR protein.
  
     0.553
ADY60678.1
Protein of unknown function DUF1552; InterPro IPR011447: IPR006311; KEGG: rba:RB3036 hypothetical protein; PFAM: Protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552).
  
     0.547
ADY58999.1
InterPro IPR013148: IPR001362; KEGG: rba:RB5832 hypothetical protein; PFAM: Glycosyl hydrolases family 32, N-terminal; SMART: Glycoside hydrolase, family 32; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 32 N-terminal domain.
  
     0.488
ADY58936.1
COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR007055: IPR006685; KEGG: rba:RB4461 hypothetical protein; PFAM: Mechanosensitive ion channel MscS; Transport-associated; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel; Putative phospholipid-binding domain.
 
     0.470
ADY61306.1
Protein of unknown function DUF1790; InterPro IPR014860; KEGG: rba:RB6282 hypothetical protein; PFAM: Protein of unknown function DUF1790; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF1790).
  
     0.464
ADY61700.1
Magnesium chelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: mmh:Mmah_1176 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: Conserved hypothetical secreted protein, CobN/Magnesium chelatase family; PFAM: CobN/Magnesium Chelatase.
  
    0.457
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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