STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59573.1KEGG: psl:Psta_3926 PDZ/DHR/GLGF domain protein; SPTR: Probable serine protease. (344 aa)    
Predicted Functional Partners:
ADY57644.1
KEGG: plm:Plim_3312 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Probable ferredoxin MJ0251-putative Fe-S containing oxidoreductase.
  
     0.736
ADY62360.1
Lipolytic protein G-D-S-L family; InterPro IPR001087; KEGG: psl:Psta_3477 hypothetical protein; PFAM: Lipase, GDSL; SPTR: Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.676
ADY62207.1
Protein of unknown function DUF116; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR002829: IPR000092; KEGG: plm:Plim_2915 protein of unknown function DUF116; PFAM: Protein of unknown function DUF116; Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; Protein of unknown function DUF116.
 
     0.663
ADY60722.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089: IPR006143; KEGG: rba:RB4310 hypothetical protein; PFAM: Biotin/lipoyl attachment; SPTR: Probable membrane protein; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
  
     0.635
ADY61792.1
FecR protein; InterPro IPR006860: IPR006558; KEGG: rba:RB2842 hypothetical protein; PFAM: FecR protein; SMART: LamG-like jellyroll fold; SPTR: Putative uncharacterized protein; PFAM: FecR protein.
  
     0.629
ADY59722.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: plm:Plim_2841 radical SAM domain protein; PFAM: Radical SAM; SPTR: AstB/chuR-related protein-putative enzyme of the MoaA / nifB / pqqE family; PFAM: Radical SAM superfamily.
  
     0.603
ADY60724.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: rba:RB4305 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
  
    0.590
ADY59551.1
KEGG: psl:Psta_0754 pyrrolo-quinoline quinone; SPTR: Putative uncharacterized protein.
  
     0.588
ADY59782.1
Prenyltransferase/squalene oxidase; InterPro IPR001330; KEGG: plm:Plim_4048 cycloartenol synthase-like protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein.
  
     0.588
ADY60017.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: psl:Psta_3389 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Probable polyvinylalcohol dehydrogenase.
  
     0.583
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.