STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59586.1RbsD or FucU transport; COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: plm:Plim_1645 RbsD or FucU transport; PFAM: RbsD/FucU transport; SPTR: RbsD or FucU transport; PFAM: RbsD / FucU transport protein family; Belongs to the RbsD / FucU family. (149 aa)    
Predicted Functional Partners:
ADY59587.1
ASCH domain protein; InterPro IPR007374; KEGG: plm:Plim_1938 protein of unknown function DUF437; PFAM: ASCH domain; SPTR: Putative uncharacterized protein; PFAM: ASCH domain.
       0.727
ADY58294.1
Rhamnulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: plm:Plim_3420 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; PRIAM: Rhamnulokinase; SPTR: Carbohydrate kinase FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase.
 
  
 0.639
ADY60732.1
Rhamnulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: plm:Plim_3420 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY, N-terminal; PRIAM: Rhamnulokinase; SPTR: Carbohydrate kinase, FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase.
 
  
 0.614
ADY57736.1
Protein of unknown function DUF1080; InterPro IPR010496: IPR011658; KEGG: rba:RB9439 putative large multi-functional protein; PFAM: Protein of unknown function DUF1080; SMART: PA14; SPTR: Putative large multi-functional protein; PFAM: Cytochrome c; PA14 domain; Domain of Unknown Function (DUF1080).
  
     0.571
ADY59585.1
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR003439; KEGG: rba:RB9076 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Hypothetical ABC transporter ATP-binding protein ybiT; PFAM: ABC transporter.
       0.570
ADY61498.1
D-arabinose 1-dehydrogenase; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: rba:RB203 oxidoreductase; PFAM: Aldo/keto reductase; PRIAM: D-arabinose 1-dehydrogenase; SPTR: Putative oxidoreductase-possibly Aldo/keto reductase; PFAM: Aldo/keto reductase family.
 
     0.554
ADY58089.1
Keratin high sulfur B2 protein; InterPro IPR002494; KEGG: rno:100362031 hypothetical protein LOC100362031; PFAM: Keratin, high sulphur B2 protein; SPTR: Novel member of the keratin associated protein 4 (Krtap4) family.
  
     0.476
ADY59244.1
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: rba:RB12640 auxin-responsive-like protein; PFAM: GH3 auxin-responsive promoter; SPTR: Probable auxin-responsive-like protein; PFAM: GH3 auxin-responsive promoter.
  
     0.400
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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