STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59587.1ASCH domain protein; InterPro IPR007374; KEGG: plm:Plim_1938 protein of unknown function DUF437; PFAM: ASCH domain; SPTR: Putative uncharacterized protein; PFAM: ASCH domain. (142 aa)    
Predicted Functional Partners:
ADY58794.1
Portal protein lambda; COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: plm:Plim_3545 portal protein lambda; PFAM: Phage portal protein, lambda; SPTR: Portal protein lambda; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family.
  
     0.735
ADY59586.1
RbsD or FucU transport; COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: plm:Plim_1645 RbsD or FucU transport; PFAM: RbsD/FucU transport; SPTR: RbsD or FucU transport; PFAM: RbsD / FucU transport protein family; Belongs to the RbsD / FucU family.
       0.727
ADY60641.1
KEGG: rba:RB11249 acyl-CoA thioesterase I; SPTR: Acyl-CoA thioesterase I-like protein.
  
     0.626
ADY62152.1
Flagellin domain protein; COGs: COG1344 Flagellin and related hook-associated protein; InterPro IPR001492; KEGG: plm:Plim_2711 flagellar hook-associated protein 3; PFAM: Flagellin, N-terminal; SPTR: Probable flagellar hook-associated protein 3; PFAM: Bacterial flagellin N-terminal helical region.
  
     0.600
ADY61046.1
KEGG: plm:Plim_2201 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.564
ADY57981.1
KEGG: plm:Plim_2454 hypothetical protein; SPTR: Tetratricopeptide repeat protein.
  
     0.551
ADY59277.1
KEGG: plm:Plim_0655 pericardin like protein; SPTR: Pericardin like protein.
  
     0.542
ADY59585.1
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR003439; KEGG: rba:RB9076 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Hypothetical ABC transporter ATP-binding protein ybiT; PFAM: ABC transporter.
       0.539
ADY57760.1
Flagellar hook-associated 2 domain-containing protein; COGs: COG1345 Flagellar capping protein; InterPro IPR003481: IPR010809; KEGG: plm:Plim_1693 flagellar hook-associated 2 domain protein; PFAM: Flagellar hook-associated 2, C-terminal; Flagellar hook-associated protein 2, N-terminal; SPTR: Flagellar hook-associated 2 domain protein; PFAM: Flagellar hook-associated protein 2 C-terminus.
  
     0.506
ADY58664.1
Parallel beta-helix repeat; InterPro IPR006626: IPR001818; KEGG: plm:Plim_0456 parallel beta-helix repeat protein; PFAM: Peptidase M10, metallopeptidase; SPTR: Parallel beta-helix repeat protein; TIGRFAM: parallel beta-helix repeat; PFAM: Leishmanolysin.
  
     0.502
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.