STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59597.1Metal dependent phosphohydrolase; COGs: COG3481 HD-superfamily hydrolase; InterPro IPR006675: IPR003607: IPR004365: IPR006674; KEGG: psl:Psta_4761 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Nucleic acid-binding protein, putative; TIGRFAM: HDIG; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG. (353 aa)    
Predicted Functional Partners:
ADY59598.1
COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: plm:Plim_2597 biotin/lipoate A/B protein ligase; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Lipoate protein ligase; PFAM: Biotin/lipoate A/B protein ligase family.
       0.531
ADY59599.1
Glycine dehydrogenase (decarboxylating) beta subunit; COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR020580; KEGG: plm:Plim_2596 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase subunit 2; PFAM: Glycine cleavage system P-protein.
       0.531
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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