STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59620.1Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: plm:Plim_3570 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Pyrrolo-quinoline quinone. (460 aa)    
Predicted Functional Partners:
ADY59138.1
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391; KEGG: rba:RB5380 serine/threonine protein kinase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Probable serine/threonine protein kinase.
  
     0.501
ADY57679.1
InterPro IPR002502: IPR006619; KEGG: plm:Plim_4129 N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; Peptidoglycan recognition protein, metazoa/bacteria; SPTR: Probable N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase.
  
    0.471
ADY60525.1
Protein of unknown function DUF1080; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR010496; KEGG: plm:Plim_0363 glucose sorbosone dehydrogenase; PFAM: Protein of unknown function DUF1080; SPTR: Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase; PFAM: Glucose / Sorbosone dehydrogenase; Domain of Unknown Function (DUF1080).
  
     0.448
ADY60389.1
Pyrrolo-quinoline quinone repeat-containing protein; COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: psl:Psta_1668 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; SPTR: Probable serine/threonine protein kinase afsK.
  
     0.434
ADY58377.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR001440: IPR019734; KEGG: plm:Plim_3586 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein.
 
   0.417
ADY58514.1
KEGG: plm:Plim_0189 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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