STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ADY59773.1Sedoheptulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: tva:TVAG_320420 FGGY family of carbohydrate kinases, N-terminal domain containing protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; PRIAM: Sedoheptulokinase; SPTR: Sugar (Pentulose and hexulose) kinases; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain. (476 aa)    
Predicted Functional Partners:
rhaA
COGs: COG4806 L-rhamnose isomerase; InterPro IPR009308; KEGG: rba:RB678 L-rhamnose isomerase; PFAM: Rhamnose isomerase; PRIAM: L-rhamnose isomerase; SPTR: L-rhamnose isomerase; TIGRFAM: Rhamnose isomerase; PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
  
 0.644
ADY59771.1
Monosaccharide ABC transporter membrane protein, CUT2 family; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: plm:Plim_0780 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Sugar ABC transporter permease protein; PFAM: Branched-chain amino acid transport system / permease component.
 
  
 0.536
xylA
COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR012307: IPR001998: IPR013452; KEGG: plm:Plim_1287 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.534
ADY61342.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006710; KEGG: rba:RB3405 putative hydrolase; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 43; SPTR: Putative hydrolase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 43; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 0.480
ADY62258.1
Glyoxylate reductase; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: rba:RB6394 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Glyoxylate reductase; SPTR: Probable 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
    0.424
ADY59772.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR013525; KEGG: sus:Acid_4640 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
       0.423
ADY58154.1
COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: sli:Slin_1070 gluconate transporter; PFAM: Gluconate transporter; SPTR: Gluconate permease gntP; PFAM: GntP family permease.
 
  
 0.417
ADY61660.1
L-fuculose-phosphate aldolase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: plm:Plim_1747 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-fuculose-phosphate aldolase; SPTR: L-fuculose-phosphate aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
 
  
 0.400
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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