STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59782.1Prenyltransferase/squalene oxidase; InterPro IPR001330; KEGG: plm:Plim_4048 cycloartenol synthase-like protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein. (377 aa)    
Predicted Functional Partners:
ADY57643.1
COGs: COG1657 Squalene cyclase; InterPro IPR001330; KEGG: plm:Plim_0903 squalene cyclase-like protein; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Probable squalene-hopene cyclase; PFAM: Pectic acid lyase; TIGRFAM: squalene/oxidosqualene cyclases.
  
  
  0.926
ADY59752.1
COGs: COG1657 Squalene cyclase; InterPro IPR006400: IPR018333: IPR001330; KEGG: plm:Plim_1904 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Squalene-hopene cyclase; TIGRFAM: Hopene cyclase; Squalene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase.
     
  0.900
ADY60926.1
Peptidase domain protein; InterPro IPR007280; KEGG: plm:Plim_1449 hypothetical protein; PFAM: Peptidase, C-terminal, archaeal/bacterial; SPTR: Putative uncharacterized protein; PFAM: Bacterial pre-peptidase C-terminal domain.
  
     0.772
ADY60925.1
InterPro IPR003343: IPR011444; KEGG: plm:Plim_1450 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Bacterial Ig-like, group 2; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.768
ADY59901.1
InterPro IPR006311: IPR011447; KEGG: psl:Psta_2274 protein of unknown function DUF1552; PFAM: Protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552).
  
     0.756
ADY59902.1
Protein of unknown function DUF1588; InterPro IPR011658: IPR013042: IPR013039; KEGG: psl:Psta_2273 protein of unknown function DUF1588; PFAM: Protein of unknown function DUF1588; Protein of unknown function DUF1592; SMART: PA14; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1588); Protein of unknown function (DUF1592); Protein of unknown function (DUF1595); PA14 domain.
  
     0.751
ADY58654.1
InterPro IPR010869; KEGG: plm:Plim_1150 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501).
  
     0.747
ADY60665.1
Protein of unknown function DUF1549; InterPro IPR003343: IPR011444; KEGG: sus:Acid_5039 hypothetical protein; PFAM: Protein of unknown function DUF1549; Bacterial Ig-like, group 2; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.742
ADY60927.1
InterPro IPR010869: IPR006311; KEGG: plm:Plim_1448 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.741
ADY58655.1
Protein of unknown function DUF1549; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019781: IPR003343: IPR011444; KEGG: plm:Plim_1151 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; Bacterial Ig-like, group 2; WD40 repeat, subgroup; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); WD domain, G-beta repeat; Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.712
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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