STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59792.1KEGG: plm:Plim_2883 hypothetical protein; SPTR: Putative uncharacterized protein. (400 aa)    
Predicted Functional Partners:
ADY59791.1
COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149; KEGG: rba:RB11985 quinone oxidoreductase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SPTR: Quinone oxidoreductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
  
    0.776
ADY61137.1
Isoleucine--tRNA ligase; COGs: COG0060 Isoleucyl-tRNA synthetase; InterPro IPR002300: IPR013155; KEGG: plm:Plim_2426 isoleucine--tRNA ligase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase.
 
     0.587
ADY59790.1
KEGG: pno:SNOG_01411 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.488
ADY59098.1
Phage terminase, small subunit, P27 family; COGs: COG3747 Phage terminase small subunit; InterPro IPR006448; KEGG: clj:CLJU_c03520 putative phage terminasesmall subunit; SPTR: Predicted phage terminase, small subunit; TIGRFAM: Phage terminase, small subunit, putative, P27; PFAM: Phage terminase, small subunit; TIGRFAM: phage terminase, small subunit, putative, P27 family.
  
     0.440
ADY62182.1
rRNA (guanine-N(2)-)-methyltransferase; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR000241; KEGG: plm:Plim_4151 putative RNA methylase; PFAM: Putative RNA methylase; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Putative RNA methylase; PFAM: Putative RNA methylase family UPF0020.
  
     0.417
ADY59768.1
SpoVG family protein; COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; InterPro IPR007170; KEGG: plm:Plim_2770 SpoVG family protein; PFAM: Sporulation stage V, protein G; SPTR: SpoVG family protein; PFAM: SpoVG; Belongs to the SpoVG family.
  
     0.407
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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