STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59793.1Transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR001808; KEGG: hoh:Hoch_2081 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp/Fnr family protein; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain. (240 aa)    
Predicted Functional Partners:
ADY60359.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: mav:MAV_0092 transcriptional regulator, Crp/Fnr family protein; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: TRANSCRIPTIONAL REGULATOR, CRP/FNR FAMILY; PFAM: Cyclic nucleotide-binding domain.
  
  
  0.926
ADY60795.1
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: gur:Gura_0851 CRP/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding; SMART: Cyclic nucleotide-binding; SPTR: TRANSCRIPTIONAL REGULATOR, CRP/FNR FAMILY; PFAM: Cyclic nucleotide-binding domain.
  
     0.693
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.569
ADY59976.1
COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR000014: IPR001610: IPR003018: IPR003661: IPR 003594: IPR001789: IPR013767: IPR013655: IPR013656; KEGG: rba:RB641 sensory histidine protein kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; GAF; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAS; PAC motif; Signal [...]
   
 
 0.550
ADY60869.1
COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR013656: IPR013767: IPR013655: IPR003018: IPR 003661: IPR003594: IPR001789: IPR000014: IPR001610; KEGG: gvi:gll3736 two-component sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAS fold; PAS fold-4; PAS fold-3; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAC motif; PAS; [...]
  
 
 0.550
ADY61212.1
Multi-sensor hybrid histidine kinase; COGs: COG0004 Ammonia permease; InterPro IPR000014: IPR003661: IPR003594: IPR001789: IPR 008207: IPR001905: IPR013767; KEGG: psl:Psta_0819 multi-sensor hybrid histidine kinase; PFAM: Ammonium transporter; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dime [...]
   
 
 0.530
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.523
ADY57945.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR013656: IPR003661: IPR003594: IPR 001789: IPR008207; KEGG: plm:Plim_2762 PAS sensor protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regul [...]
   
 
 0.505
ADY59243.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014: IPR001610: IPR003661: IPR003594: IPR 001789: IPR008207: IPR013655: IPR013767; KEGG: ttr:Tter_2194 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; PAS fold; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosph [...]
   
 
 0.505
ADY60481.1
BRCT domain protein; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterPro IPR019734: IPR001357: IPR000551: IPR001440; KEGG: plm:Plim_2188 tetratricopeptide TPR_2 repeat protein; PFAM: BRCT; HTH transcriptional regulator, MerR; Tetratricopeptide TPR-1; SPTR: Probable O-linked GlcNAc transferase; PFAM: Tetratricopeptide repeat; BRCA1 C Terminus (BRCT) domain.
   
 
 0.483
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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