STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59804.1WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019781; KEGG: rba:RB617 WD-40 repeat-containing regulatory protein; PFAM: WD40 repeat, subgroup; SPTR: Probable WD-40 repeat regulatory protein; PFAM: WD domain, G-beta repeat. (535 aa)    
Predicted Functional Partners:
ADY58333.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: ptm:GSPATT00030591001 hypothetical protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: Chromosome undetermined scaffold_117, whole genome shotgun sequence; PFAM: WD domain, G-beta repeat.
  
     0.757
ADY61644.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: NB-ARC domain protein; PFAM: WD domain, G-beta repeat.
  
     0.744
ADY61255.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: psl:Psta_3530 planctomycete cytochrome c; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
  
    0.666
ADY60666.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: sus:Acid_5038 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
  
     0.619
ADY61285.1
InterPro IPR004155; KEGG: ana:alr1903 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Alr1903 protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat.
  
    0.598
ADY60924.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: plm:Plim_1451 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
  
   0.585
ADY61619.1
Serine/threonine protein kinase with WD40 repeats; COGs: COG2319 FOG: WD40 repeat; InterPro IPR017442: IPR019781: IPR020635: IPR002290: IPR 001680; KEGG: plm:Plim_0575 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; WD40 repeat; SPTR: WD40-repeat containing protein; PFAM: Protein kinase domain; WD domain, G-beta repeat.
  
    0.551
ADY59803.1
Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001680: IPR001254: IPR019781; KEGG: psl:Psta_1852 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; WD40 repeat, subgroup; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; WD domain, G-beta repeat.
  
 
 
0.547
ADY60246.1
KEGG: psl:Psta_0787 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.531
ADY58611.1
COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: bph:Bphy_3371 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused.
  
     0.517
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.