STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59980.1Glutamine--scyllo-inositol transaminase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: plm:Plim_0836 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family. (402 aa)    
Predicted Functional Partners:
ADY59924.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: plm:Plim_4167 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein.
  
 0.858
ADY59227.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR020019: IPR003362: IPR001451; KEGG: ngk:NGK_0123 PglB; PFAM: Bacterial sugar transferase; Bacterial transferase hexapeptide repeat; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Putative uncharacterized protein; TIGRFAM: Sialic acid O-acyltransferase, NeuD; PFAM: Bacterial sugar transferase; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
 0.797
ADY59583.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_0917 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.743
ADY59234.1
Transferase hexapeptide repeat containing protein; COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR001451; KEGG: dtu:Dtur_0577 transferase hexapeptide repeat containing protein; PFAM: Bacterial transferase hexapeptide repeat; SPTR: Transferase hexapeptide repeat containing protein; PFAM: Bacterial transferase hexapeptide (three repeats).
  
 0.682
ADY60364.1
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509: IPR005888; KEGG: drt:Dret_0307 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.682
ADY59229.1
COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: lhk:LHK_02802 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; manually curated; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.656
ADY59396.1
KEGG: plm:Plim_0653 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.655
ADY58161.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.591
ADY59850.1
Nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: plm:Plim_4103 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Lipopolysaccharide biosynthesis protein; TIGRFAM: Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenas [...]
 
  
 0.576
ADY61076.1
Dolichyl-phosphate beta-D-mannosyltransferase; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173: IPR007267; KEGG: sat:SYN_02391 cell wall biogenesis glycosyltransferase; PFAM: Glycosyl transferase, family 2; GtrA-like protein; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Glycosyltransferase involved in cell wall biogenesis; PFAM: GtrA-like protein; Glycosyl transferase family 2.
  
  
 0.571
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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