STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY59996.1Protein of unknown function DUF423; COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: plm:Plim_0328 protein of unknown function DUF423; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF423). (148 aa)    
Predicted Functional Partners:
ADY59995.1
KEGG: caa:Caka_2926 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Natural resistance-associated macrophage protein.
       0.773
ADY59994.1
COGs: COG0824 thioesterase; InterPro IPR006684: IPR006683; KEGG: rba:RB8265 putative a thioesterase; PFAM: Thioesterase superfamily; SPTR: Putative uncharacterized protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family.
 
     0.539
ADY61951.1
Protein of unknown function DUF420; COGs: COG2322 membrane protein; InterPro IPR003782: IPR007352; KEGG: plm:Plim_0216 protein of unknown function DUF420; PFAM: Protein of unknown function DUF420; Copper chaperone SCO1/SenC; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF420); SCO1/SenC.
 
    0.478
ADY58350.1
Protein of unknown function DUF227; InterPro IPR004119: IPR015897; KEGG: caa:Caka_0240 protein of unknown function DUF227; PFAM: Protein of unknown function DUF227; SMART: CHK kinase-like; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF227).
  
     0.473
ADY59997.1
KEGG: plm:Plim_3837 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.446
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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