STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60047.1COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: plm:Plim_3622 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich domain; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain. (258 aa)    
Predicted Functional Partners:
ADY59595.1
Lactate utilization protein B/C; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741; KEGG: plm:Plim_3623 protein of unknown function DUF162; PFAM: Lactate utilization protein B/C; SPTR: Putative electron transport protein ykgF-putative 4Fe-4S containing oxidoreductase; PFAM: Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein.
 
 0.994
ADY59454.1
Lactate utilization protein B/C; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: ade:Adeh_2977 hypothetical protein; PFAM: Lactate utilization protein B/C; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
 
 
 0.942
ADY60046.1
Hypothetical protein; KEGG: cbf:CLI_1278 monovalent cation:proton antiporter-2 (CPA2) family protein; SPTR: Putative uncharacterized protein.
       0.723
ADY60485.1
3-hydroxybutyryl-CoA epimerase; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR001753: IPR006176: IPR006108; KEGG: aeh:Mlg_2111 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; Crotonase, core; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; PRIAM: 3-hydroxybutyryl-CoA epimerase; SPTR: Fatty acid oxidation complex alpha subunit; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
  
 0.489
ADY60452.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752: IPR002880; KEGG: rba:RB6935 2-oxoglutarate ferredoxin oxidoreductase alpha subunit; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase alpha subunit; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxid [...]
  
  
 0.419
ADY60048.1
KEGG: plm:Plim_3249 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.404
ADY62237.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; KEGG: plm:Plim_3983 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide binding domain.
  
  
 0.402
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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