STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60058.1COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; KEGG: plm:Plim_3095 secretory protein YscJ/FliF family protein; SPTR: Probable polar flagellar M-ring protein FliF. (540 aa)    
Predicted Functional Partners:
ADY60056.1
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299: IPR010930; KEGG: plm:Plim_3955 flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
 
 0.998
ADY60059.1
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: plm:Plim_3096 flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.
 
 
 0.998
ADY60055.1
KEGG: plm:Plim_3954 flagellar basal-body rod protein FlgB; SPTR: Probable flagellar basal-body rod protein FlgB.
  
 
 0.997
fliE
HAMAP: Flagellar hook-basal body complex protein FliE; InterPro IPR001624; KEGG: plm:Plim_3956 flagellar hook-basal body complex subunit FliE; PFAM: Flagellar hook-basal body complex protein FliE; SPTR: Flagellar hook-basal body complex protein fliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE.
  
 
 0.996
ADY60066.1
Fagellar hook-basal body protein; COGs: COG1749 Flagellar hook protein FlgE; InterPro IPR020013: IPR001444: IPR011491: IPR010930; KEGG: plm:Plim_3682 flagellar basal body FlaE domain protein; PFAM: Flagellar basal body FlaE; Flagellar basal body rod protein, N-terminal; Protein of unknown function DUF1078, C-terminal; SPTR: Flagellar hook protein FlgE; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: flagellar basal-body rod protein FlgB; fagellar hook-basal body [...]
  
 
 0.991
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
 
 0.991
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
 
 0.991
ADY62157.1
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
 
 0.990
ADY60060.1
Flagellar assembly protein FliH/Type III secretion system HrpE; COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein; InterPro IPR018035; KEGG: plm:Plim_3097 flagellar assembly protein FliH; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; SPTR: Flagellar assembly protein fliH, putative; PFAM: Flagellar assembly protein FliH.
  
  
 0.989
ADY60061.1
Type III secretion system ATPase, FliI/YscN; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714: IPR003593: IPR004100: IPR000194; KEGG: plm:Plim_3098 ATPase, FliI/YscN family; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellum-specific ATP synthase; TIGRFAM: ATPase, type III secretion system, FliI/YscN; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthas [...]
  
  
 0.987
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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