STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60072.1Hypothetical protein; KEGG: plm:Plim_4068 flagellar biosynthesis protein FliO; SPTR: Putative uncharacterized protein; PFAM: Flagellar biosynthesis protein, FliO. (361 aa)    
Predicted Functional Partners:
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.993
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
  
 0.983
ADY60121.1
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: plm:Plim_2500 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
  
 
 0.983
ADY60059.1
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: plm:Plim_3096 flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.
  
  
 0.962
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.959
ADY60075.1
Type III secretion system inner membrane R protein; COGs: COG1684 Flagellar biosynthesis pathway component FliR; InterPro IPR002010; KEGG: plm:Plim_4065 type III secretion system inner membrane R protein; PFAM: Type III secretion system inner membrane R protein; SPTR: Flagellar biosynthetic protein fliR/B; PFAM: Bacterial export proteins, family 1.
  
  
 0.931
ADY60071.1
COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR012826: IPR001543; KEGG: psl:Psta_4353 flagellar motor switch protein FliN; PFAM: Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein fliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN.
  
  
 0.891
ADY60058.1
COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; KEGG: plm:Plim_3095 secretory protein YscJ/FliF family protein; SPTR: Probable polar flagellar M-ring protein FliF.
  
  
 0.887
ADY60065.1
COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: plm:Plim_3102 flagellar hook capping protein; PFAM: Flagellar hook capping protein; SPTR: Probable basal-body rod modification protein FlgD; PFAM: Flagellar hook capping protein.
  
  
 0.880
ADY60061.1
Type III secretion system ATPase, FliI/YscN; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterPro IPR005714: IPR003593: IPR004100: IPR000194; KEGG: plm:Plim_3098 ATPase, FliI/YscN family; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: H(+)-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core; SPTR: Flagellum-specific ATP synthase; TIGRFAM: ATPase, type III secretion system, FliI/YscN; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthas [...]
  
  
 0.874
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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