STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60089.1Transcriptional regulator, ArsR family; InterPro IPR001845; KEGG: rba:RB11223 metal-dependent regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Probable transcription regulator; PFAM: Bacterial regulatory protein, arsR family. (125 aa)    
Predicted Functional Partners:
ADY60090.1
Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rba:RB11225 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain.
  
    0.608
ADY61713.1
Regulatory protein ArsR; InterPro IPR001845; KEGG: nhl:Nhal_2982 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family.
  
     0.601
ADY59172.1
Regulatory protein ArsR; InterPro IPR001845; KEGG: psl:Psta_1414 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Probable transcription regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.583
ADY60091.1
Rhodanese-like protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: nhl:Nhal_2910 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
  
 0.505
ADY60088.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311: IPR000683; KEGG: plm:Plim_3924 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
       0.460
ADY60093.1
Rhodanese-like protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: rba:RB11227 hypothetical protein; PFAM: Rhodanese-like; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
  
 0.425
ADY60126.1
Acyl-(acyl-carrier-protein)--phospholipid O-acyltransferase; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR002123: IPR011701: IPR000873; KEGG: plm:Plim_2369 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase; Major facilitator superfamily MFS-1; PRIAM: Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: AMP-dependent synthetase and ligase; PFAM: Acyltransferase; AMP-binding enzyme; Major Facilitator Superfamily; TIGRFAM: 1-acyl-sn [...]
     
 0.418
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.