STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60090.1Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rba:RB11225 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain. (180 aa)    
Predicted Functional Partners:
ADY60091.1
Rhodanese-like protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: nhl:Nhal_2910 beta-lactamase domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
 0.930
ADY60093.1
Rhodanese-like protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: rba:RB11227 hypothetical protein; PFAM: Rhodanese-like; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
0.724
ADY60092.1
Protein of unknown function DUF81; COGs: COG0730 permease; InterPro IPR002781; KEGG: tcx:Tcr_0174 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.
 
    0.682
ADY60089.1
Transcriptional regulator, ArsR family; InterPro IPR001845; KEGG: rba:RB11223 metal-dependent regulatory protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Probable transcription regulator; PFAM: Bacterial regulatory protein, arsR family.
  
    0.608
ADY59305.1
Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: psl:Psta_0461 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Putative uncharacterized protein; PFAM: Rhodanese-like domain.
 
     0.586
ADY57997.1
Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: plm:Plim_3494 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Probable molybdopterin-synthase sulfurylase; PFAM: Rhodanese-like domain.
  
     0.560
ADY61641.1
Rhodanese-like protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: plm:Plim_4038 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain.
  
     0.559
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.528
rpsQ
SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.493
ADY60095.1
COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: psl:Psta_0464 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
     
 0.441
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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