STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60211.1KEGG: plm:Plim_1668 hypothetical protein; SPTR: Putative uncharacterized protein. (459 aa)    
Predicted Functional Partners:
ADY61491.1
COGs: COG1538 Outer membrane protein; KEGG: rba:RB183 putative outer membrane protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
     0.745
ADY57697.1
HTTM domain protein; InterPro IPR011020; KEGG: plm:Plim_0154 HTTM domain protein; SMART: HTTM; SPTR: Putative uncharacterized protein; PFAM: Vitamin K-dependent gamma-carboxylase.
  
     0.660
ADY60210.1
Hypothetical protein; InterPro IPR006311; KEGG: plm:Plim_1667 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.659
ADY60043.1
KEGG: plm:Plim_0259 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
ADY59244.1
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: rba:RB12640 auxin-responsive-like protein; PFAM: GH3 auxin-responsive promoter; SPTR: Probable auxin-responsive-like protein; PFAM: GH3 auxin-responsive promoter.
  
     0.643
ADY61220.1
KEGG: plm:Plim_0670 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.641
ADY58706.1
Hypothetical protein; InterPro IPR012902; KEGG: plm:Plim_1856 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.613
ADY60577.1
KEGG: rba:RB4532 MchE protein; SPTR: MchE protein-like.
  
     0.568
ADY60522.1
DEAD/DEAH box helicase domain protein; COGs: COG4581 Superfamily II RNA helicase; InterPro IPR014001: IPR001650: IPR011545; KEGG: psl:Psta_1777 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
  
     0.558
ADY61714.1
COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: plm:Plim_2817 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain.
  
     0.555
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.