STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60324.1Cytochrome c class I; InterPro IPR003088; KEGG: plm:Plim_2959 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Probable PbrT protein-possibly cytochrome c; PFAM: Cytochrome c. (486 aa)    
Predicted Functional Partners:
ADY60649.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR003468: IPR004677; KEGG: rba:RB6350 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subuni [...]
 
 0.955
ADY62244.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.851
ADY62237.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; KEGG: plm:Plim_3983 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: Molydopterin dinucleotide binding domain.
  
 
 0.845
ADY57936.1
KEGG: plm:Plim_3310 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.721
ADY60323.1
KEGG: mxa:MXAN_2741 hypothetical protein; SPTR: Conserved domain protein.
       0.658
ADY59174.1
InterPro IPR011467; KEGG: plm:Plim_3670 protein of unknown function DUF1573; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573).
  
     0.612
ADY59866.1
Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: plm:Plim_2956 uncharacterized protein required for cytochrome oxidase assembly-like protein; PFAM: Cytochrome oxidase assembly; SPTR: Putative uncharacterized protein; PFAM: Cytochrome oxidase assembly protein.
 
   
 0.594
ADY60036.1
Prenyltransferase/squalene oxidase; InterPro IPR001330; KEGG: plm:Plim_0306 A-macroglobulin complement component; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein.
  
     0.590
ADY59578.1
COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2805 outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
     0.575
ADY57662.1
InterPro IPR002541; KEGG: plm:Plim_1297 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein.
  
     0.563
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.