STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60335.1Abortive infection protein; InterPro IPR003675; KEGG: plm:Plim_3105 abortive infection protein; PFAM: Abortive infection protein; SPTR: Putative metal-dependent membrane protease; PFAM: CAAX amino terminal protease family. (368 aa)    
Predicted Functional Partners:
ADY60214.1
Hypothetical protein; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: plm:Plim_2361 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent deoxyribonuclease subunit B.
 
     0.493
ADY60334.1
Riboflavin kinase; COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865: IPR002606; KEGG: plm:Plim_0714 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; PRIAM: FAD synthetase., Riboflavin kinase; SPTR: Riboflavin biosynthesis protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
       0.478
ADY58180.1
Abortive infection protein; COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR003675; KEGG: psl:Psta_1550 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family.
 
    0.467
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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