STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60354.1InterPro IPR012307; KEGG: plm:Plim_1610 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel. (341 aa)    
Predicted Functional Partners:
ADY60355.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: fbc:FB2170_14628 conserved hypothetical protein BH0710; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
 
    0.903
ADY60188.1
KEGG: plm:Plim_1608 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.776
ADY61506.1
KEGG: dfe:Dfer_3173 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation.
  
     0.770
ADY61924.1
Heme-binding protein; InterPro IPR013427: IPR010496: IPR003088; KEGG: plm:Plim_3308 heme-binding protein; PFAM: Protein of unknown function DUF1080; Cytochrome c, class I; SPTR: Heme-binding protein; TIGRFAM: Haem-binding domain, putative; PFAM: Cytochrome c; Domain of Unknown Function (DUF1080); TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.768
ADY60956.1
KEGG: psl:Psta_2567 signal peptide and transmembrane prediction; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation.
  
     0.767
ADY60595.1
Heme-binding protein; InterPro IPR013427; KEGG: plm:Plim_1723 heme-binding protein; SPTR: Heme-binding protein; TIGRFAM: Haem-binding domain, putative; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.763
ADY61224.1
FG-GAP repeat protein; InterPro IPR013517; KEGG: rba:RB5763 signal peptide; PFAM: FG-GAP; SPTR: Putative uncharacterized protein; PFAM: FG-GAP repeat.
  
     0.761
ADY60687.1
InterPro IPR010869: IPR006311; KEGG: plm:Plim_1121 protein of unknown function DUF1501; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501).
  
     0.757
ADY60686.1
InterPro IPR011444; KEGG: plm:Plim_1120 protein of unknown function DUF1549; PFAM: Protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.753
ADY61988.1
Membrane-bound dehydrogenase domain protein; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR013428: IPR001087; KEGG: psl:Psta_0895 membrane-bound dehydrogenase domain protein; PFAM: Lipase, GDSL; SPTR: Putative uncharacterized protein; TIGRFAM: Putative membrane-bound dehydrogenase; TIGRFAM: putative membrane-bound dehydrogenase domain.
  
     0.747
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.