STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60602.1KEGG: rba:RB7871 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase. (494 aa)    
Predicted Functional Partners:
ADY60601.1
Acetyl xylan esterase; InterPro IPR008391; KEGG: psl:Psta_2878 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1).
 
     0.890
ADY60964.1
COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; KEGG: rba:RB1356 N-acetylglucosamine-6-phosphate deacetylase NagA; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: N-acetylglucosamine-6-phosphate deacetylase NAGA; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.777
ADY59785.1
COGs: COG3458 Acetyl esterase (deacetylase); InterPro IPR008391; KEGG: rba:RB5616 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1).
  
     0.770
ADY60836.1
InterPro IPR013428: IPR013427; KEGG: psl:Psta_1635 membrane-bound dehydrogenase domain protein; SPTR: Cytochrome c-like protein; TIGRFAM: Putative membrane-bound dehydrogenase; Haem-binding domain, putative; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
 
     0.762
ADY60804.1
COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR006104: IPR013428: IPR013427; KEGG: psl:Psta_3304 membrane-bound dehydrogenase domain protein; PFAM: Oxidoreductase, N-terminal; Glycoside hydrolase family 2, carbohydrate-binding; SPTR: Putative uncharacterized protein; TIGRFAM: Putative membrane-bound dehydrogenase; Haem-binding domain, putative; PFAM: Cytochrome c; Oxidoreductase family, NAD-binding Rossmann fold; Glycosyl hydrolases family 2, sugar binding domain; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Ver [...]
 
     0.758
ADY61807.1
FG-GAP repeat protein; COGs: COG4692 neuraminidase (sialidase); InterPro IPR013517; KEGG: rba:RB8789 hypothetical protein; PFAM: FG-GAP; SPTR: Putative uncharacterized protein; PFAM: FG-GAP repeat.
  
     0.748
ADY59025.1
KEGG: rba:RB11055 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BNR/Asp-box repeat.
  
     0.722
ADY61642.1
InterPro IPR006311: IPR012307; KEGG: sus:Acid_4452 xylose isomerase domain-containing protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel.
  
     0.674
ADY61224.1
FG-GAP repeat protein; InterPro IPR013517; KEGG: rba:RB5763 signal peptide; PFAM: FG-GAP; SPTR: Putative uncharacterized protein; PFAM: FG-GAP repeat.
  
     0.661
ADY61811.1
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: rba:RB3804 signal peptide; PFAM: Protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.658
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.