STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60642.1InterPro IPR004714; KEGG: gau:GAU_3782 FixS protein; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: FixS protein; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type. (55 aa)    
Predicted Functional Partners:
ADY60649.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR003468: IPR004677; KEGG: rba:RB6350 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subuni [...]
 
  
 0.877
ADY60646.1
Cytochrome c oxidase accessory protein CcoG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: rba:RB6355 iron-sulfur protein; SPTR: Probable iron-sulfur protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG.
 
  
 0.875
ADY60643.1
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR006121: IPR008250: IPR005834: IPR006416: IPR 001757; KEGG: rba:RB6360 cation-transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Probable cation-transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding d [...]
 
  
 0.872
ADY60644.1
COGs: COG2836 conserved hypothetical protein; KEGG: rba:RB6357 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome C biogenesis protein transmembrane region.
 
     0.859
ADY60645.1
FixH family protein; InterPro IPR008620; KEGG: rba:RB6356 nitrogen fixation protein FixH; PFAM: FixH; SPTR: Similar to nitrogen fixation protein fixH; PFAM: FixH.
  
  
 0.828
ADY60647.1
InterPro IPR003088; KEGG: rba:RB6353 cytochrome c oxidase (chain III, cbb3-type); PFAM: Cytochrome c, class I; SPTR: Cytochrome c oxidase (Chain III, cbb3-type); PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
  
 0.791
ADY60648.1
KEGG: rba:RB6351 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.661
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.