STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60719.1Hypothetical protein; KEGG: rba:RB4317 signal peptide; SPTR: Putative uncharacterized protein. (109 aa)    
Predicted Functional Partners:
ADY60625.1
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR008250: IPR005834: IPR006404: IPR006416: IPR 001757; KEGG: rba:RB4891 cadmium-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Zinc-exporting ATPase; SPTR: Cadmium-transporting ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal trans [...]
  
 
 0.790
ADY60643.1
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR006121: IPR008250: IPR005834: IPR006416: IPR 001757; KEGG: rba:RB6360 cation-transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Probable cation-transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding d [...]
  
 
 0.790
ADY60720.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: rba:RB4314 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
       0.765
ADY58328.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: bbe:BBR47_57590 putative penicillinase repressor; PFAM: Penicillinase repressor; SPTR: Transcriptional regulator blaI family protein; PFAM: Penicillinase repressor.
  
  
 0.617
ADY61471.1
Transcriptional repressor, CopY family; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: smt:Smal_3667 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; PFAM: Penicillinase repressor.
  
  
 0.617
ADY60721.1
KEGG: rba:RB4311 signal peptide; SPTR: Putative uncharacterized protein.
       0.616
ADY60718.1
KEGG: cpv:cgd6_5400 protein with signal peptide plus thr stretch, cys rich, possible mucin; SPTR: Putative uncharacterized protein.
       0.453
ADY60722.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089: IPR006143; KEGG: rba:RB4310 hypothetical protein; PFAM: Biotin/lipoyl attachment; SPTR: Probable membrane protein; TIGRFAM: Secretion protein HlyD; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
       0.445
ADY60481.1
BRCT domain protein; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterPro IPR019734: IPR001357: IPR000551: IPR001440; KEGG: plm:Plim_2188 tetratricopeptide TPR_2 repeat protein; PFAM: BRCT; HTH transcriptional regulator, MerR; Tetratricopeptide TPR-1; SPTR: Probable O-linked GlcNAc transferase; PFAM: Tetratricopeptide repeat; BRCA1 C Terminus (BRCT) domain.
  
 
 0.415
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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