STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60778.1NolW domain protein; InterPro IPR005644; KEGG: plm:Plim_4190 NolW domain protein; PFAM: NolW-like; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II/III secretion system short domain. (1235 aa)    
Predicted Functional Partners:
ADY60785.1
KEGG: plm:Plim_3639 type II secretory pathway component PulK-like protein; SPTR: Probable general secretion pathway protein K; PFAM: General secretion pathway protein K.
 
   
 0.823
ADY58456.1
InterPro IPR004846; KEGG: plm:Plim_0641 hypothetical protein; PFAM: Type II/III secretion system; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
     0.773
ADY60777.1
KEGG: spo:SPAC23H4.09 curved DNA-binding protein Cdb4; SPTR: Curved DNA-binding protein.
       0.773
ADY61615.1
InterPro IPR011521; KEGG: plm:Plim_1186 YTV domain protein; PFAM: YTV; SPTR: YTV domain protein; PFAM: YTV.
  
     0.773
ADY62277.1
KEGG: plm:Plim_1806 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
ADY59649.1
COGs: COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor; KEGG: plm:Plim_3319 uncharacterized photosystem II stability/assembly factor-like protein; SPTR: Putative uncharacterized protein.
 
     0.772
ADY62278.1
KEGG: plm:Plim_1805 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
ADY60414.1
KEGG: rba:RB8677 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: KaiC.
 
     0.771
ADY57779.1
InterPro IPR011521; KEGG: plm:Plim_0937 YTV domain protein; PFAM: YTV; SPTR: Putative uncharacterized protein; PFAM: YTV.
  
     0.770
ADY61046.1
KEGG: plm:Plim_2201 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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