STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60860.1COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cyc:PCC7424_2242 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain. (135 aa)    
Predicted Functional Partners:
ADY60861.1
COGs: COG4566 Response regulator; InterPro IPR001789: IPR000792; KEGG: rme:Rmet_1194 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
    
0.783
ADY60858.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655: IPR003661: IPR003594: IPR001789: IPR 008207: IPR000014: IPR001610; KEGG: mgm:Mmc1_3189 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kin [...]
  
 
 0.543
ADY61212.1
Multi-sensor hybrid histidine kinase; COGs: COG0004 Ammonia permease; InterPro IPR000014: IPR003661: IPR003594: IPR001789: IPR 008207: IPR001905: IPR013767; KEGG: psl:Psta_0819 multi-sensor hybrid histidine kinase; PFAM: Ammonium transporter; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dime [...]
  
 
 0.538
ADY60121.1
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: plm:Plim_2500 flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA); SPTR: Flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
  
  
 0.488
ADY60859.1
Hypothetical protein; KEGG: met:M446_5104 signal transduction histidine kinase, nitrogen specific, NtrB; SPTR: Signal transduction histidine kinase, nitrogen specific, NtrB.
       0.480
ADY60059.1
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090; KEGG: plm:Plim_3096 flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.
  
  
 0.475
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.474
ADY59855.1
CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR008207: IPR003594: IPR002545: IPR001789: IPR 004105; KEGG: plm:Plim_1906 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup, homodimeric; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; CheW-like protein; Signal transduction response regulator, receiver domain; SMART: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotran [...]
  
 
 0.474
ADY59022.1
COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR020006: IPR000897: IPR003593; KEGG: psl:Psta_3558 GTP-binding signal recognition particle SRP54 G-domain protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: ATPase, AAA+ type, core; SPTR: GTP-binding signal recognition particle SRP54, G-domain; TIGRFAM: Signal-recognition particle (SRP)-type GTPase; manually curated; PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF.
  
  
 0.467
ADY60862.1
COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: psl:Psta_0130 response regulator receiver protein; SPTR: Response regulator receiver protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
    0.465
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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