STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60868.1KEGG: psl:Psta_0124 hypothetical protein; SPTR: Putative uncharacterized protein. (508 aa)    
Predicted Functional Partners:
ADY60867.1
TadE family protein; InterPro IPR012495; KEGG: psl:Psta_0125 TadE family protein; PFAM: TadE-like; SPTR: TadE family protein; PFAM: TadE-like protein.
       0.732
ADY60865.1
Type II secretion system F domain protein; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: psl:Psta_0127 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.710
ADY60866.1
TadE family protein; InterPro IPR012495; KEGG: rba:RB1153 signal peptide; PFAM: TadE-like; SPTR: Putative uncharacterized protein; PFAM: TadE-like protein.
       0.686
ADY60863.1
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: rba:RB1147 secretory protein kinase; PFAM: Type II secretion system protein E; SPTR: Secretory protein kinase; PFAM: Type II/IV secretion system protein.
  
  
 0.680
ADY60864.1
Type II secretion system F domain protein; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: psl:Psta_0128 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.584
ADY60862.1
COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: psl:Psta_0130 response regulator receiver protein; SPTR: Response regulator receiver protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
  
 0.535
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.