STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY60922.1Peptidase S1 and S6 chymotrypsin/Hap; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: psl:Psta_2452 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: Putative uncharacterized protein; PFAM: Trypsin. (759 aa)    
Predicted Functional Partners:
ADY62253.1
PDZ/DHR/GLGF domain protein; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478; KEGG: plm:Plim_1811 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.769
ADY62273.1
PDZ/DHR/GLGF domain protein; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478; KEGG: plm:Plim_1810 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Serine proteinase, HtrA/DegQ/DegS family; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.722
ADY60043.1
KEGG: plm:Plim_0259 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.612
ADY60044.1
KEGG: plm:Plim_0258 pyrrolo-quinoline quinone; SPTR: Putative uncharacterized protein.
  
     0.539
ADY60924.1
WD40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781: IPR001680; KEGG: plm:Plim_1451 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C.
 
 
  0.524
ADY58208.1
COGs: COG3239 Fatty acid desaturase; InterPro IPR012899: IPR005804; KEGG: net:Neut_1694 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; Domain of unknown function, Spy-related; SPTR: Fatty acid desaturase; PFAM: Fatty acid desaturase.
  
     0.500
ADY59320.1
InterPro IPR002035; KEGG: psl:Psta_1809 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain.
  
     0.498
ADY60923.1
Peroxiredoxin; COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: rba:RB2244 glutathione peroxidase; PFAM: Glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; PFAM: Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.486
ADY59758.1
KEGG: psl:Psta_0747 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding.
  
     0.457
ADY59365.1
Type IV / VI secretion system, DotU; COGs: COG3455 conserved hypothetical protein; InterPro IPR017732; KEGG: psl:Psta_1825 hypothetical protein; PFAM: Type IV / VI secretion system, DotU; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family.
  
     0.455
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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